![hyfr clean hyfr clean](http://i.ytimg.com/vi/e-XOcrXUoas/0.jpg)
Superfamily database of structural and functional annotation More.SUPFAM i View protein in SMART SM00382, AAA, 1 hit SM00065, GAF, 1 hit Simple Modular Architecture Research Tool a protein domain database More.SMART i View protein in Pfam PF01590, GAF, 1 hit PF00158, Sigma54_activat, 1 hit Integrated resource of protein families, domains and functional sites More.InterPro i Gene3D Structural and Functional Annotation of Protein Families More.Gene3D i InParanoid: Eukaryotic Ortholog Groups More.InParanoid iĭatabase for complete collections of gene phylogenies More.PhylomeDB i
Hyfr clean manual#
Manual assertion inferred by curator from iĬited for: NUCLEOTIDE SEQUENCE, POSSIBLE FUNCTION, MOTIF.Įvolutionary genealogy of genes: Non-supervised Orthologous Groups More.eggNOG i This subsection of the 'Family and Domains' section describes a short (usually not more than 20 amino acids) conserved sequence motif of biological iĬys-rich segment, might bind a metal cluster 1 Publication Sigma-54 factor interaction PROSITE-ProRule annotation This subsection of the Family and Domains section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or i This section provides information on sequence similarities with other proteins and the domain(s) present in a & Domains i Domains and Repeats Feature key It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed lineage iĬellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacterales › Enterobacteriaceae › Escherichia › Escherichia coli This subsection of the Names and taxonomy section contains the taxonomic hierarchical classification lineage of the source organism. This is known as the 'taxonomic identifier' or 'taxid'.More.Taxonomic identifier i This subsection of the Names and taxonomy section shows the unique identifier assigned by the NCBI to the source organism of the protein.
![hyfr clean hyfr clean](https://i1.wp.com/jojo-ent.com/v2012/wp-content/uploads/2015/01/panda-ski-mask.jpeg)
This subsection of the Names and taxonomy section provides information on the name(s) of the organism that is the source of the protein i
Hyfr clean code#
More information in the GO evidence code guide Used to indicate a direct assay for the function, process or component indicated by the GO term. The Gene Ontology (GO) project provides a set of hierarchical controlled vocabulary split into 3 categories:More.GO - Molecular function i This subsection of the Function section specifies the position and type of each DNA-binding domain present within the binding i Manual validated information which has been generated by the UniProtKB automatic annotation system. It always involves more than one amino acid and includes all residues involved in binding i This subsection of the Function section describes a region in the protein which binds nucleotide phosphates.